THE LIFE LABORATORY 生命实验室

1.2 THE ENERGY OF LIFE

CHEMOSYNTHESIS

Is there life on Mars? Is there no life on Mars?
Science doesn’t know. Science isn’t quite up to speed yet!

— Lecturer Nikadilov, Carnival Night (1956 Soviet film)

Organisms capable of chemosynthesis occupy a unique place in the energetics of life. Chemosynthesis is a mode of autotrophic nutrition in which the primary energy source is derived from the oxidation of inorganic compounds – such as sulphur, iron, hydrogen, and nitrogen – as well as methane.

Chemoautotrophs do not depend directly on solar energy and thrive in some of the planet’s most extreme and inaccessible environments: the deep ocean, beneath the seafloor, within soils, and inside wetlands. They function as natural consumers of toxic substances, drive the formation of mineral deposits, and naturally purify wastewater.

Today, the global impact of chemosynthesis is being profoundly reevaluated. Discoveries have revealed that the biomass of the deep subterranean biosphere beneath the ocean floor – which includes chemosynthetic, anaerobic, methane-oxidizing archaea – is comparable to, or may even exceed, the biomass of the entire remaining biosphere. Consequently, scientists have hypothesized that chemosynthesis could sustain microbial life beneath the surface of Mars and other planetary bodies.

Life is far more extraordinary than it appears!

CHEMOAUTOTROPHS: WHO ARE THEY?

CHEMOAUTOTROPHIC GROUPSUBSTRATE OXIDIZED (ENERGY SOURCE)
Nitrifying Bacteria
Nitrosomonas
Nitrobacter
Nitrosococcus
Ammonia (NH₃) → nitrites (NO₂⁻) → nitrates (NO₃⁻)
Sulphur-Oxidizing (Thionic) Bacteria
Beggiatoa
Thiobacillus
Hydrogen sulphide (H₂S), thiosulfates, sulphur (S) → sulphates (SO₄²⁻)
Iron-Oxidizing Bacteria
Geobacter
Gallionella
Leptothrix
Ferrous iron (Fe²⁺) → ferric iron (Fe³⁺)
Hydrogen-Oxidizing Bacteria
Hydrogenomonas
Molecular hydrogen (H₂)
Methanogenic Archaea (Methanogens)
Methanobacterium
Methanosarcina
Methanococcus
Hydrogen (H₂) + carbon dioxide (CO₂) → methane (CH₄)

PARTNERS IN CHEMOSYNTHESIS

To thrive in the deep ocean where sunlight never penetrates, organisms can either directly harness the chemical energy of hydrothermal vents or cooperate with those that do. Symbiosis with chemoautotrophic bacteria is an evolutionary strategy that enables life to flourish in these extreme environments.

ENDOSYMBIOSIS

Example: Riftia pachyptila (Vestimentiferan tube worm)

BIOLOGICAL MECHANICS:

  1. The tube worm absorbs O₂, H₂S, and CO₂ directly from the water.
  2. Specialized haemoglobin binds O₂ and H₂S into a unique HSHbO₂ complex and transports it to the trophosome.
  3. Bacteria within the trophosome oxidize H₂S to generate ATP and NAD(P)H.
  4. Utilizing the Calvin cycle, the bacteria fix CO₂ to synthesize organic molecules.
  5. These organic nutrients are released directly into the worm’s bloodstream and distributed throughout its body.

EXOSYMBIOSIS

Example: Yeti Crab (Kiwa hirsuta)

BIOLOGICAL MECHANICS:

  1. The crab extends its densely bristled claws directly into the nutrient-rich fluid streams of a hydrothermal vent.
  2. The water flow supplies H₂S (hydrogen sulphide) and O₂ (oxygen).
  3. Bacteria living on the setae (bristles) oxidize the sulphur compounds to generate metabolic energy (ATP).
  4. Using this energy, the bacteria drive the reductive tricarboxylic acid cycle to fix CO₂ and produce organic matter.
  5. As the bacteria proliferate on the bristles, the crab scrapes off the accumulated microbial biomass and consumes it.

1.2 生命的能量

化能合成作用

“火星上有生命吗?火星上没有生命吗?
科学还不知道。科学还没发展到那一步!”

—— 影片《狂欢之夜》,讲师尼卡季洛夫台词

化能合成生物在地球生命能量体系中占据特殊地位。这是一种自养营养方式,依靠氧化硫、铁、氢、氮、甲烷等无机物的化学反应获取能量。

化能合成生物不直接依赖太阳光。它们栖息于人迹难至之处:大洋深渊、海床之下、土壤、沼泽。它们可以消耗有毒物质,促成有用矿产形成,还可以净化污水。

如今人类正在重新评估化能合成在地球上的意义。现已发现,海床之下的地下生物圈(包含厌氧氧化甲烷古菌)的生物量,与整个地表生物圈相当,甚至更大。有假说提出,化能合成或许可以维系火星以及其他行星地表之下的生命。

生命,远比我们想象的更加奇妙!

谁是化能合成生物?

化能合成生物类群被氧化的物质(能源)
硝化细菌
亚硝化单胞菌属 Nitrosomonas
硝化杆菌属 Nitrobacter
亚硝化球菌属 Nitrosococcus
氨 (NH₃) → 亚硝酸盐 (NO₂⁻) → 硝酸盐 (NO₃⁻)
硫细菌和硫氧化细菌
贝氏硫菌属 Beggiatoa
硫杆菌属 Thiobacillus
硫化氢 (H₂S),硫代硫酸盐,硫 (S) → 硫酸盐 (SO₄²⁻)
铁细菌
地杆菌属 Geobacter
披毛菌属 Gallionella
纤毛菌属 Leptothrix
二价铁 (Fe²⁺) → 三价铁 (Fe³⁺)
氢细菌
氢单胞菌属 Hydrogenomonas
分子氢 (H₂)
产甲烷古菌
甲烷杆菌属 Methanobacterium
甲烷八叠球菌属 Methanosarcina
甲烷球菌属 Methanococcus
氢 (H₂) + 二氧化碳 (CO₂) → 甲烷 (CH₄)

谁与化能合成生物共生?

想要在不见阳光的大洋深处生存,可以利用热液喷口释放的化学能,或是与掌握这项本领的生物结成伙伴。与化能合成细菌共生,就是生物在极端环境下得以存活的演化策略。

内共生

例子: 巨型管虫(Riftia pachyptila)

作用机制:

  1. 管虫从水体中获取氧气、硫化氢和二氧化碳。
  2. 管虫血液中的血红蛋白将氧气与硫化氢结合为 HSHbO₂ 复合物,并输送至营养体。
  3. 营养体内的细菌氧化硫化氢,生成三磷酸腺苷(ATP)和还原型辅酶 NAD(P)H。
  4. 营养体内的细菌通过卡尔文循环,利用二氧化碳合成有机物。
  5. 有机物进入管虫血液,输送至全身各处。

外共生

例子: 多毛基瓦蟹(雪人蟹,Kiwa hirsuta)

作用机制:

  1. 栖息在热液喷口附近的雪人蟹,将布满刚毛的螯伸入热液流中。
  2. 热液带来硫化氢(H₂S)与氧气(O₂)。
  3. 刚毛上附着的细菌氧化硫化物,获取能量(ATP)。
  4. 细菌利用该能量启动逆向三羧酸循环,固定二氧化碳并合成有机物。
  5. 细菌在刚毛上生长繁殖,雪人蟹刮取这些细菌团作为食物。